Publications

Gina El-Nesr, Simon Dürr, Irimpan I. Mathews, Q. Wen, K. Zhao, Ritimukta Sarangi, Ursula Rothlisberger, Fanny Sunden, Possu Huang (2026). Zero-shot design of a de novo metalloenzyme. bioRxiv.

Simon Dürr (2025). AllMetal3D. AllMetal3D.

Simon Dürr, Ursula Rothlisberger (2024). Predicting metal-protein interactions using cofolding methods: Status quo. ML4LMS.

Simon Dürr, Andrea Levy, Ursula Rothlisberger (2023). Metal3D: a general deep learning framework for accurate metal ion location prediction in proteins. Nature Comms.